Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | BK664_07390 | Not Available | Positive | 1666393 - 1668924 | 90817.3 |
| ribosome-binding factor a | BK664_07395 | Not Available | Positive | 1669084 - 1669485 | 14948.9 |
| trna pseudouridine(55) synthase trub | BK664_07400 | Not Available | Positive | 1669489 - 1670406 | 33481.1 |
| 30s ribosomal protein s15 | BK664_07405 | Not Available | Positive | 1670524 - 1670793 | 10161.4 |
| polyribonucleotide nucleotidyltransferase | BK664_07410 | Not Available | Positive | 1670991 - 1673096 | 74864.3 |
| Trna-thr | Not Available | Not Available | Positive | 1673236 - 1673311 | Not Available |
| dephospho-coa kinase | BK664_07420 | Not Available | Positive | 1673446 - 1673751 | 11765.7 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | BK664_07425 | Not Available | Negative | 1673802 - 1674650 | 30506.0 |
| thymidine phosphorylase | BK664_07430 | Not Available | Positive | 1674936 - 1677146 | 82567.1 |
| n-acetylmuramoyl-l-alanine amidase | BK664_07435 | Not Available | Positive | 1677211 - 1677771 | 20651.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
