Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster-binding protein | BK664_07240 | Not Available | Negative | 1635768 - 1637222 | 53533.6 |
| oxidoreductase | BK664_07245 | Not Available | Negative | 1637219 - 1638043 | 30229.1 |
| l-lactate permease | BK664_07250 | Not Available | Negative | 1638195 - 1639889 | 59627.0 |
| transcriptional regulator pdhr | BK664_07255 | Not Available | Positive | 1640152 - 1640919 | 28885.5 |
| ssra-binding protein | BK664_07260 | Not Available | Negative | 1641067 - 1641549 | 18361.3 |
| sodium-dependent transporter | BK664_07265 | Not Available | Positive | 1641668 - 1643071 | 50659.1 |
| ubiquinone-binding protein | BK664_07270 | Not Available | Positive | 1643079 - 1643513 | 15867.0 |
| rnfh family protein | BK664_07275 | Not Available | Positive | 1643506 - 1643820 | 11071.5 |
| hypothetical protein | BK664_07280 | Not Available | Negative | 1643884 - 1644411 | 19124.9 |
| transcriptional repressor | BK664_07285 | Not Available | Positive | 1644509 - 1644913 | 15359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
