Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kynureninase | BK664_06975 | Not Available | Positive | 1565251 - 1566501 | 45707.6 |
| porin | BK664_06980 | Not Available | Positive | 1566605 - 1567918 | 48097.5 |
| amino acid permease | BK664_06985 | Not Available | Positive | 1568007 - 1569416 | 51153.8 |
| lysr family transcriptional regulator | BK664_06990 | Not Available | Negative | 1569582 - 1570466 | 32150.9 |
| hypothetical protein | BK664_06995 | Not Available | Positive | 1570690 - 1571454 | 26380.8 |
| antibiotic biosynthesis monooxygenase | BK664_07000 | Not Available | Negative | 1571444 - 1571758 | 12303.5 |
| nadph quinone reductase mdab | BK664_07005 | Not Available | Positive | 1571919 - 1572509 | 21861.9 |
| lysr family transcriptional regulator | BK664_07010 | Not Available | Positive | 1572567 - 1573478 | 33812.4 |
| epimerase | BK664_07015 | Not Available | Positive | 1573582 - 1574475 | 31488.6 |
| sodium-independent anion transporter | BK664_07020 | Not Available | Positive | 1574694 - 1576139 | 51458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
