Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | BK664_06725 | Not Available | Positive | 1504431 - 1505435 | 36737.1 |
| iron abc transporter permease | BK664_06730 | Not Available | Positive | 1505690 - 1507306 | 59138.2 |
| glycine cleavage system protein t | BK664_06735 | Not Available | Positive | 1507462 - 1508544 | 39746.8 |
| glycine cleavage system protein h | BK664_06740 | Not Available | Positive | 1508595 - 1508978 | 13321.4 |
| aminotransferase degt | BK664_06745 | Not Available | Negative | 1509042 - 1510181 | 41206.5 |
| glycine dehydrogenase (aminomethyl-transferring) | BK664_06750 | Not Available | Positive | 1510337 - 1513210 | 104046.0 |
| porin | BK664_06755 | Not Available | Negative | 1513273 - 1513938 | 24703.3 |
| ribonucleotide reductase | BK664_06760 | Not Available | Negative | 1514153 - 1514470 | 10913.1 |
| type ii secretion system protein e | BK664_06765 | Not Available | Negative | 1514544 - 1516328 | 66248.9 |
| hypothetical protein | BK664_06770 | Not Available | Negative | 1516419 - 1516757 | 12553.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
