Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK664_06620 | Not Available | Negative | 1485570 - 1486241 | 24574.6 |
| amino acid abc transporter substrate-binding protein | BK664_06625 | Not Available | Negative | 1486263 - 1487048 | 28215.3 |
| gntr family transcriptional regulator | BK664_06630 | Not Available | Positive | 1487305 - 1488012 | 25266.5 |
| thioredoxin | BK664_06635 | Not Available | Positive | 1488133 - 1488462 | 11791.2 |
| transcription termination factor rho | BK664_06640 | Not Available | Positive | 1488710 - 1489969 | 46987.2 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | BK664_06645 | Not Available | Positive | 1490111 - 1491577 | 54618.1 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | BK664_06650 | Not Available | Positive | 1491577 - 1492545 | 35673.9 |
| sn-glycerol-3-phosphate transporter | BK664_06655 | Not Available | Negative | 1492560 - 1493036 | 17423.7 |
| gamma-glutamylcyclotransferase | BK664_06660 | Not Available | Positive | 1493388 - 1494056 | 25230.1 |
| glycerol-3-phosphate transporter | BK664_06665 | Not Available | Negative | 1494032 - 1495381 | 49584.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
