Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase | BK664_06570 | Not Available | Positive | 1473718 - 1475616 | 67560.1 |
| duf188 domain-containing protein | BK664_06575 | Not Available | Positive | 1475725 - 1476180 | 16397.0 |
| isoprenoid biosynthesis protein elbb | BK664_06580 | Not Available | Negative | 1476290 - 1476958 | 23271.9 |
| hypothetical protein | BK664_06585 | Not Available | Positive | 1477074 - 1478309 | 47103.2 |
| hypothetical protein | BK664_06590 | Not Available | Negative | 1478290 - 1478922 | 23824.7 |
| delta-aminolevulinic acid dehydratase | BK664_06595 | Not Available | Positive | 1479131 - 1480144 | 37079.4 |
| rna degradosome polyphosphate kinase | BK664_06600 | Not Available | Positive | 1480163 - 1482385 | 83201.8 |
| exopolyphosphatase | BK664_06605 | Not Available | Negative | 1482463 - 1483965 | 56257.7 |
| amino acid abc transporter atp-binding protein | BK664_06610 | Not Available | Negative | 1484199 - 1484936 | 26749.7 |
| amino acid abc transporter permease | BK664_06615 | Not Available | Negative | 1484923 - 1485573 | 23639.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
