Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | BK664_06420 | Not Available | Negative | 1445331 - 1446035 | 25920.7 |
| tyrosine recombinase xerc | BK664_06425 | Not Available | Negative | 1446032 - 1446931 | 33770.5 |
| hypothetical protein | BK664_06430 | Not Available | Negative | 1446934 - 1447659 | 27015.3 |
| diaminopimelate epimerase | BK664_06435 | Not Available | Negative | 1447673 - 1448503 | 30116.3 |
| diaminopimelate decarboxylase | BK664_06440 | Not Available | Negative | 1448508 - 1449755 | 45097.8 |
| iron donor protein cyay | BK664_06445 | Not Available | Positive | 1450268 - 1450600 | 12636.6 |
| hypothetical protein | BK664_06450 | Not Available | Positive | 1450605 - 1450823 | 8022.73 |
| nucleoside diphosphate kinase regulator | BK664_06455 | Not Available | Positive | 1451008 - 1451418 | 14665.6 |
| adenylate cyclase | BK664_06460 | Not Available | Negative | 1451426 - 1454272 | 108834.0 |
| tigr02647 family protein | BK664_06465 | Not Available | Negative | 1454478 - 1454723 | 8734.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
