Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_06150 | Not Available | Negative | 1385241 - 1386149 | 33964.6 |
| fmn-dependent nadh-azoreductase | BK664_06155 | Not Available | Positive | 1386279 - 1386890 | 21475.4 |
| dienelactone hydrolase | BK664_06160 | Not Available | Positive | 1387060 - 1388097 | 37316.9 |
| mfs transporter | BK664_06165 | Not Available | Negative | 1388216 - 1389403 | 41067.6 |
| abc-f family atpase | BK664_06170 | Not Available | Negative | 1389658 - 1391223 | 58264.7 |
| aspartyl beta-hydroxylase | BK664_06175 | Not Available | Positive | 1391742 - 1392641 | 34555.7 |
| ku protein | BK664_06180 | Not Available | Negative | 1392788 - 1393648 | 31610.0 |
| hypothetical protein | BK664_06185 | Not Available | Positive | 1393852 - 1394208 | 12365.5 |
| oxidoreductase | BK664_06190 | Not Available | Positive | 1394260 - 1395411 | 41963.8 |
| ribosomal-protein-alanine acetyltransferase | BK664_06195 | Not Available | Negative | 1395431 - 1396528 | 41364.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
