Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_06000 | Not Available | Negative | 1357192 - 1358085 | 33317.7 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BK664_06005 | Not Available | Positive | 1358188 - 1359279 | 39716.4 |
| agmatinase | BK664_06010 | Not Available | Positive | 1359293 - 1360252 | 34664.8 |
| oxidoreductase | BK664_06015 | Not Available | Negative | 1360379 - 1361431 | 37609.9 |
| transcriptional regulator | BK664_06020 | Not Available | Positive | 1361636 - 1362352 | 26309.8 |
| ketosteroid isomerase | BK664_06025 | Not Available | Positive | 1362405 - 1362746 | 12434.8 |
| cell division protein zape | BK664_06030 | Not Available | Positive | 1362774 - 1363892 | 42029.2 |
| damage-inducible protein dinb | BK664_06035 | Not Available | Positive | 1363909 - 1364490 | 22170.3 |
| gnat family n-acetyltransferase | BK664_06040 | Not Available | Positive | 1364604 - 1365095 | 17519.4 |
| hypothetical protein | BK664_06045 | Not Available | Negative | 1365144 - 1365350 | 7779.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
