Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe2+ zn2+ uptake regulation protein | BK664_05895 | Not Available | Negative | 1331488 - 1331859 | 13496.3 |
| peptide abc transporter substrate-binding protein | BK664_05900 | Not Available | Negative | 1332303 - 1333304 | 37244.2 |
| hypothetical protein | BK664_05905 | Not Available | Negative | 1333403 - 1338244 | 180312.0 |
| lactate dehydrogenase | BK664_05910 | Not Available | Positive | 1338476 - 1339516 | 36296.3 |
| hypothetical protein | BK664_05915 | Not Available | Negative | 1339611 - 1339928 | 11337.5 |
| hypothetical protein | BK664_05920 | Not Available | Positive | 1340094 - 1340345 | 9440.31 |
| lysr family transcriptional regulator | BK664_05925 | Not Available | Negative | 1340320 - 1341255 | 33339.5 |
| nitrilase | BK664_05930 | Not Available | Positive | 1341341 - 1342264 | 32981.8 |
| hypothetical protein | BK664_05935 | Not Available | Negative | 1342288 - 1342761 | 16860.5 |
| mfs transporter | BK664_05945 | Not Available | Negative | 1343698 - 1345008 | 47352.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
