Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | BK664_05790 | Not Available | Negative | 1307824 - 1310916 | 110243.0 |
| efflux transporter periplasmic adaptor subunit | BK664_05795 | Not Available | Negative | 1310932 - 1312089 | 41220.1 |
| dna-binding response regulator | BK664_05800 | Not Available | Positive | 1312382 - 1313083 | 26323.8 |
| two-component sensor histidine kinase | BK664_05805 | Not Available | Positive | 1313088 - 1314389 | 48958.1 |
| transcriptional regulator | BK664_05810 | Not Available | Negative | 1314513 - 1315289 | 29221.9 |
| rna polymerase subunit sigma-70 | BK664_05815 | Not Available | Negative | 1315286 - 1315693 | 15124.1 |
| hypothetical protein | BK664_05820 | Not Available | Negative | 1315838 - 1316374 | 19682.2 |
| sam-dependent methyltransferase | BK664_05825 | Not Available | Positive | 1316581 - 1317354 | 27739.0 |
| hydroxyacid dehydrogenase | BK664_05830 | Not Available | Negative | 1317475 - 1318428 | 34924.1 |
| alpha/beta hydrolase | BK664_05835 | Not Available | Negative | 1318442 - 1319467 | 38012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
