Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4946 domain-containing protein | BK664_05685 | Not Available | Positive | 1283994 - 1284518 | 19122.9 |
| transcriptional regulator | BK664_05690 | Not Available | Negative | 1284695 - 1285057 | 13532.3 |
| lysr family transcriptional regulator | BK664_05700 | Not Available | Negative | 1286939 - 1287811 | 32044.7 |
| eama family transporter | BK664_05705 | Not Available | Positive | 1287891 - 1288835 | 33535.2 |
| 4-hydroxyphenylpyruvate dioxygenase | BK664_05710 | Not Available | Positive | 1289088 - 1290164 | 40277.2 |
| chemotaxis protein | BK664_05715 | Not Available | Negative | 1290228 - 1291115 | 32901.6 |
| nadp-dependent oxidoreductase | BK664_05720 | Not Available | Negative | 1291313 - 1292326 | 37216.9 |
| mfs transporter | BK664_05725 | Not Available | Negative | 1292535 - 1293845 | 47437.1 |
| cdar family transcriptional regulator | BK664_05730 | Not Available | Positive | 1294015 - 1295145 | 42040.9 |
| glycerate kinase | BK664_05735 | Not Available | Positive | 1295400 - 1296542 | 39075.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
