Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_05635 | Not Available | Positive | 1275159 - 1275389 | 8715.27 |
| hypothetical protein | BK664_05640 | Not Available | Negative | 1275401 - 1275682 | 9701.34 |
| hypothetical protein | BK664_05645 | Not Available | Negative | 1275822 - 1276010 | 6623.7 |
| utp--glucose-1-phosphate uridylyltransferase | BK664_05650 | Not Available | Positive | 1276269 - 1277108 | 31022.6 |
| glutathione-disulfide reductase | BK664_05655 | Not Available | Positive | 1277239 - 1278597 | 49421.5 |
| integrase | BK664_05660 | Not Available | Negative | 1278594 - 1279613 | 38749.3 |
| recombinase | BK664_05665 | Not Available | Positive | 1279792 - 1280736 | 35422.5 |
| peroxiredoxin | BK664_05670 | Not Available | Positive | 1280882 - 1281445 | 20415.2 |
| alkyl hydroperoxide reductase subunit f | BK664_05675 | Not Available | Positive | 1281585 - 1283147 | 55719.1 |
| lactoylglutathione lyase | BK664_05680 | Not Available | Negative | 1283327 - 1283848 | 19552.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
