Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter substrate-binding protein | BK664_05585 | Not Available | Negative | 1267109 - 1267876 | 27091.2 |
| 2-nitropropane dioxygenase | BK664_05590 | Not Available | Negative | 1268103 - 1269167 | 37835.7 |
| alcohol dehydrogenase | BK664_05595 | Not Available | Positive | 1269357 - 1270340 | 34387.3 |
| arac family transcriptional regulator | BK664_05600 | Not Available | Positive | 1270393 - 1270881 | 18046.8 |
| bifunctional transcriptional activator/dna repair enzyme protein ada | BK664_05605 | Not Available | Negative | 1270845 - 1271918 | 38712.8 |
| alpha-ketoglutarate-dependent dioxygenase alkb | BK664_05610 | Not Available | Negative | 1272004 - 1272669 | 24528.5 |
| proline hydroxylase | BK664_05615 | Not Available | Negative | 1272674 - 1273378 | 26923.3 |
| cysteine methyltransferase | BK664_05620 | Not Available | Negative | 1273375 - 1273881 | 18520.3 |
| hypothetical protein | BK664_05625 | Not Available | Negative | 1274215 - 1274517 | 11499.8 |
| hypothetical protein | BK664_05630 | Not Available | Positive | 1274730 - 1275086 | 12685.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
