Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | BK664_05485 | Not Available | Positive | 1247368 - 1248348 | 35401.0 |
| metal abc transporter permease | BK664_05490 | Not Available | Positive | 1248345 - 1249016 | 23930.3 |
| hypothetical protein | BK664_05495 | Not Available | Positive | 1249080 - 1249280 | 7916.79 |
| abc transporter permease | BK664_05500 | Not Available | Positive | 1249468 - 1251528 | 73756.8 |
| abc transporter substrate-binding protein | BK664_05505 | Not Available | Positive | 1251532 - 1252593 | 38456.9 |
| homocysteine s-methyltransferase | BK664_05510 | Not Available | Positive | 1252590 - 1253510 | 32770.1 |
| peptide-methionine (s)-s-oxide reductase | BK664_05515 | Not Available | Positive | 1253507 - 1253974 | 17126.2 |
| oxidoreductase | BK664_05520 | Not Available | Positive | 1254121 - 1255503 | 50811.8 |
| gntr family transcriptional regulator | BK664_05525 | Not Available | Negative | 1255584 - 1256327 | 27396.0 |
| abc transporter | BK664_05530 | Not Available | Positive | 1256464 - 1257303 | 31014.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
