Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligand-gated channel | BK664_05385 | Not Available | Negative | 1225149 - 1227671 | 90979.0 |
| abc transporter permease | BK664_05390 | Not Available | Positive | 1228061 - 1228945 | 32234.2 |
| sulfonate abc transporter atp-binding protein | BK664_05395 | Not Available | Positive | 1228947 - 1229747 | 28839.2 |
| nitrate abc transporter substrate-binding protein | BK664_05400 | Not Available | Positive | 1229773 - 1230798 | 36539.7 |
| energy transducer tonb | BK664_05405 | Not Available | Positive | 1230846 - 1231658 | 28706.0 |
| biopolymer transporter exbb | BK664_05410 | Not Available | Positive | 1231745 - 1232467 | 25687.0 |
| biopolymer transporter exbd | BK664_05415 | Not Available | Positive | 1232469 - 1232870 | 14382.5 |
| monooxygenase | BK664_05420 | Not Available | Positive | 1233214 - 1234539 | 49266.1 |
| had family hydrolase | BK664_05425 | Not Available | Positive | 1234653 - 1235444 | 29094.5 |
| transporter | BK664_05430 | Not Available | Positive | 1235652 - 1236275 | 21900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
