Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BK664_05335 | Not Available | Negative | 1212848 - 1213825 | 34844.7 |
| ferredoxin | BK664_05340 | Not Available | Negative | 1213838 - 1214215 | 14038.5 |
| oxidoreductase | BK664_05345 | Not Available | Negative | 1214212 - 1215822 | 57657.2 |
| tonb-dependent receptor | BK664_05350 | Not Available | Negative | 1216163 - 1218637 | 89984.6 |
| taurine catabolism dioxygenase taud | BK664_05355 | Not Available | Negative | 1218732 - 1219601 | 33244.4 |
| sulfurtransferase | BK664_05360 | Not Available | Negative | 1219705 - 1221303 | 58371.9 |
| cysteine dioxygenase | BK664_05365 | Not Available | Negative | 1221300 - 1221908 | 22540.6 |
| lysr family transcriptional regulator | BK664_05370 | Not Available | Positive | 1222149 - 1223054 | 32950.4 |
| class ii aldolase | BK664_05375 | Not Available | Positive | 1223177 - 1223971 | 28748.1 |
| alkanesulfonate monooxygenase | BK664_05380 | Not Available | Negative | 1224033 - 1225121 | 39985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
