Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BK664_05285 | Not Available | Positive | 1198624 - 1200288 | 59905.3 |
| ligand-gated channel | BK664_05290 | Not Available | Negative | 1200355 - 1202850 | 90070.2 |
| hypothetical protein | BK664_05295 | Not Available | Negative | 1202887 - 1203384 | 17183.9 |
| monoamine oxidase | BK664_05300 | Not Available | Negative | 1203409 - 1204983 | 57051.7 |
| tonb-dependent receptor | BK664_05305 | Not Available | Negative | 1205018 - 1207150 | 78911.1 |
| dihydrofolate reductase | BK664_05310 | Not Available | Negative | 1207590 - 1208549 | 34139.6 |
| acyl-coa dehydrogenase | BK664_05315 | Not Available | Negative | 1208546 - 1209733 | 42694.8 |
| aliphatic sulfonate abc transporter substrate-binding protein | BK664_05320 | Not Available | Negative | 1209770 - 1210780 | 37022.3 |
| alkyl hydroperoxide reductase | BK664_05325 | Not Available | Negative | 1210794 - 1211477 | 24820.8 |
| monooxygenase | BK664_05330 | Not Available | Negative | 1211474 - 1212820 | 49836.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
