Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_05125 | Not Available | Positive | 1158508 - 1160601 | 77590.2 |
| formaldehyde dehydrogenase, glutathione-independent | BK664_05130 | Not Available | Negative | 1160785 - 1161984 | 42346.9 |
| short-chain dehydrogenase | BK664_05140 | Not Available | Negative | 1162900 - 1163655 | 26346.8 |
| short-chain dehydrogenase | BK664_05145 | Not Available | Negative | 1163668 - 1164435 | 27037.6 |
| tetr family transcriptional regulator | BK664_05150 | Not Available | Positive | 1164728 - 1165435 | 26760.6 |
| pyrroline-5-carboxylate reductase | BK664_05155 | Not Available | Positive | 1165425 - 1166201 | 26965.6 |
| glyoxalase | BK664_05160 | Not Available | Negative | 1166271 - 1166654 | 13433.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | BK664_05165 | Not Available | Negative | 1166718 - 1167842 | 39365.6 |
| n-methylproline demethylase | BK664_05170 | Not Available | Negative | 1167904 - 1169940 | 75157.9 |
| 2og-fe(ii) oxygenase | BK664_05175 | Not Available | Positive | 1170299 - 1171288 | 37087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
