Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | BK664_04975 | Not Available | Positive | 1128746 - 1129564 | 29711.8 |
| sugar abc transporter substrate-binding protein | BK664_04980 | Not Available | Positive | 1129687 - 1130691 | 35594.7 |
| l-arabinose abc transporter atp-binding protein arag | BK664_04985 | Not Available | Positive | 1130755 - 1132305 | 55857.1 |
| l-arabinose abc transporter permease arah | BK664_04990 | Not Available | Positive | 1132315 - 1133283 | 34177.2 |
| gntr family transcriptional regulator | BK664_04995 | Not Available | Positive | 1133555 - 1134268 | 26665.1 |
| adp-ribosylglycohydrolase | BK664_05000 | Not Available | Positive | 1134265 - 1135263 | 34448.5 |
| allantoin permease | BK664_05005 | Not Available | Positive | 1135485 - 1136951 | 51444.2 |
| sugar kinase | BK664_05010 | Not Available | Positive | 1136944 - 1137873 | 32343.5 |
| termination factor rho | BK664_05015 | Not Available | Negative | 1137989 - 1138369 | 13954.5 |
| hypothetical protein | BK664_05020 | Not Available | Negative | 1138443 - 1138697 | 9122.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
