Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase molybdopterin binding subunit | BK654_08765 | Not Available | Positive | 2025830 - 2028229 | 87605.4 |
| xanthine dehydrogenase accessory protein xdhc | BK654_08770 | Not Available | Positive | 2028353 - 2029195 | 30650.3 |
| guanine deaminase | BK654_08775 | Not Available | Positive | 2029215 - 2030519 | 47880.1 |
| gntr family transcriptional regulator | BK654_08780 | Not Available | Negative | 2030650 - 2031414 | 28129.6 |
| hypothetical protein | BK654_08785 | Not Available | Positive | 2031658 - 2032848 | 41048.9 |
| hypothetical protein | BK654_08790 | Not Available | Negative | 2032996 - 2033340 | 12826.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BK654_08795 | Not Available | Positive | 2033575 - 2035041 | 52515.4 |
| ggdef domain-containing protein | BK654_08800 | Not Available | Negative | 2035177 - 2037564 | 88402.1 |
| 23s rrna (guanine(2445)-n(2))/(guanine(2069)-n(7))- methyltransferase | BK654_08805 | Not Available | Negative | 2037709 - 2039979 | 85216.0 |
| dihydroorotate dehydrogenase (quinone) | BK654_08810 | Not Available | Negative | 2040893 - 2041912 | 35733.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
