Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | BK664_04775 | Not Available | Positive | 1091092 - 1091715 | 23304.7 |
| abc transporter | BK664_04780 | Not Available | Positive | 1091849 - 1092781 | 34409.9 |
| abc transporter permease | BK664_04785 | Not Available | Positive | 1092778 - 1093557 | 28594.0 |
| atp-binding protein | BK664_04790 | Not Available | Negative | 1093603 - 1094124 | 20288.3 |
| dna internalization-related competence protein comec/rec2 | BK664_04795 | Not Available | Positive | 1094260 - 1096482 | 81579.7 |
| biopolymer transporter exbb | BK664_04800 | Not Available | Positive | 1096581 - 1097216 | 22929.6 |
| biopolymer transporter exbd | BK664_04805 | Not Available | Positive | 1097213 - 1097644 | 15592.7 |
| tetraacyldisaccharide 4'-kinase | BK664_04810 | Not Available | Positive | 1097644 - 1098654 | 37189.9 |
| hypothetical protein | BK664_04815 | Not Available | Positive | 1098678 - 1098863 | 6630.19 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | BK664_04820 | Not Available | Positive | 1098860 - 1099624 | 27755.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
