Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | BK664_04675 | Not Available | Positive | 1071501 - 1073465 | 69146.2 |
| hypothetical protein | BK664_04680 | Not Available | Negative | 1073966 - 1074724 | 28422.6 |
| Trna-glu | Not Available | Not Available | Positive | 1075118 - 1075193 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1075197 - 1075272 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1075378 - 1075453 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1075457 - 1075532 | Not Available |
| dna-binding response regulator | BK664_04705 | Not Available | Negative | 1075591 - 1076448 | 32637.3 |
| hypothetical protein | BK664_04710 | Not Available | Positive | 1076494 - 1077654 | 41961.8 |
| pilus assembly protein cpaf | BK664_04715 | Not Available | Positive | 1077658 - 1079091 | 53214.4 |
| type ii secretion system protein | BK664_04720 | Not Available | Positive | 1079685 - 1080596 | 33030.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
