Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | BK664_04625 | Not Available | Positive | 1061198 - 1061857 | 24532.8 |
| duf4892 domain-containing protein | BK664_04630 | Not Available | Positive | 1061866 - 1062672 | 29370.1 |
| ai-2e family transporter | BK664_04635 | Not Available | Positive | 1062742 - 1063797 | 37978.7 |
| histidine kinase | BK664_04640 | Not Available | Negative | 1063892 - 1064740 | 28996.4 |
| two-component sensor histidine kinase | BK664_04645 | Not Available | Negative | 1064881 - 1065933 | 39086.2 |
| dna-binding response regulator | BK664_04650 | Not Available | Negative | 1065933 - 1066691 | 28802.8 |
| orotidine 5'-phosphate decarboxylase | BK664_04655 | Not Available | Positive | 1066949 - 1067683 | 26007.8 |
| nadp-dependent oxidoreductase | BK664_04660 | Not Available | Negative | 1067815 - 1068819 | 35545.2 |
| short chain dehydrogenase | BK664_04665 | Not Available | Positive | 1069055 - 1069816 | 26158.6 |
| gntr family transcriptional regulator | BK664_04670 | Not Available | Positive | 1070001 - 1071392 | 50724.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
