Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_08710 | Not Available | Negative | 2009276 - 2011351 | 75351.1 |
| amino acid abc transporter substrate-binding protein | BK654_08715 | Not Available | Positive | 2011495 - 2012262 | 28334.1 |
| ggdef domain-containing protein | BK654_08720 | Not Available | Negative | 2012214 - 2013956 | 65219.4 |
| transcriptional regulator | BK654_08725 | Not Available | Positive | 2014297 - 2014611 | 11456.8 |
| hypothetical protein | BK654_08735 | Not Available | Negative | 2015025 - 2016185 | 44026.1 |
| dna ligase (nad(+)) liga | BK654_08740 | Not Available | Negative | 2016262 - 2018625 | 85883.7 |
| cell division protein zipa | BK654_08745 | Not Available | Negative | 2018758 - 2019603 | 31268.0 |
| chromosome segregation protein smc | BK654_08750 | Not Available | Negative | 2019862 - 2023350 | 130986.0 |
| gntr family transcriptional regulator | BK654_08755 | Not Available | Negative | 2023353 - 2024012 | 24847.3 |
| xanthine dehydrogenase small subunit | BK654_08760 | Not Available | Positive | 2024383 - 2025837 | 53143.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
