Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_04195 | Not Available | Positive | 982254 - 982784 | 19008.9 |
| hypothetical protein | BK664_04200 | Not Available | Positive | 982849 - 983040 | 6735.82 |
| spermidine synthase | BK664_04205 | Not Available | Positive | 983250 - 984125 | 32712.2 |
| hypothetical protein | BK664_04210 | Not Available | Positive | 984289 - 984522 | 8640.16 |
| superfamily ii dna/rna helicase, snf2 family protein | BK664_04215 | Not Available | Positive | 984736 - 985077 | 12823.0 |
| hypothetical protein | BK664_04220 | Not Available | Positive | 985539 - 986948 | 52500.9 |
| hypothetical protein | BK664_04225 | Not Available | Positive | 986961 - 987911 | 35617.4 |
| transglutaminase | BK664_04230 | Not Available | Positive | 987908 - 988717 | 30487.9 |
| cytochrome c | BK664_04235 | Not Available | Negative | 988840 - 989661 | 30008.0 |
| acetyl-coa acetyltransferase | BK664_04240 | Not Available | Positive | 990260 - 991465 | 41999.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
