Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK664_04095 | Not Available | Negative | 960926 - 961483 | 20376.2 |
| gntr family transcriptional regulator | BK664_04100 | Not Available | Positive | 961660 - 962313 | 24653.5 |
| hypothetical protein | BK664_04105 | Not Available | Positive | 962329 - 963180 | 32000.9 |
| duf2897 domain-containing protein | BK664_04110 | Not Available | Negative | 963226 - 963393 | 6244.57 |
| ethanolamine permease | BK664_04115 | Not Available | Negative | 963518 - 964882 | 48342.5 |
| dtdp-4-dehydrorhamnose reductase | BK664_04120 | Not Available | Negative | 965080 - 965949 | 31945.2 |
| glucose-1-phosphate thymidylyltransferase | BK664_04125 | Not Available | Negative | 966014 - 966895 | 32727.1 |
| dtdp-glucose 4,6-dehydratase | BK664_04130 | Not Available | Negative | 966892 - 967974 | 40277.7 |
| potassium-transporting atpase subunit f | BK664_04135 | Not Available | Positive | 968282 - 968371 | 3146.05 |
| potassium-transporting atpase subunit kdpa | BK664_04140 | Not Available | Positive | 968380 - 970074 | 60134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
