Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | BK664_03995 | Not Available | Positive | 934486 - 935598 | 39563.4 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | BK664_04000 | Not Available | Positive | 935627 - 937834 | 78131.4 |
| cytidylate kinase | BK664_04005 | Not Available | Positive | 937831 - 938520 | 24779.8 |
| 30s ribosomal protein s1 | BK664_04010 | Not Available | Positive | 938641 - 940329 | 62157.8 |
| hypothetical protein | BK664_04015 | Not Available | Positive | 940547 - 940825 | 9969.1 |
| integration host factor subunit beta | BK664_04020 | Not Available | Positive | 940978 - 941274 | 11076.3 |
| hypothetical protein | BK664_04025 | Not Available | Positive | 941302 - 941541 | 8468.18 |
| glycosyl transferase | BK664_04030 | Not Available | Negative | 942149 - 943159 | 36396.6 |
| nad-dependent dehydratase | BK664_04035 | Not Available | Negative | 943156 - 944115 | 34371.0 |
| glycosyltransferase wbub | BK664_04040 | Not Available | Negative | 944118 - 945296 | 44116.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
