Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid transport protein | BK664_03895 | Not Available | Negative | 908203 - 909489 | 45931.5 |
| hypothetical protein | BK664_03900 | Not Available | Negative | 909635 - 910117 | 17811.4 |
| hypothetical protein | BK664_03905 | Not Available | Negative | 910392 - 910616 | 8292.97 |
| hypothetical protein | BK664_03910 | Not Available | Positive | 911687 - 911938 | 9250.17 |
| recombinase rmuc | BK664_03915 | Not Available | Positive | 912000 - 913478 | 55183.4 |
| hybrid sensor histidine kinase/response regulator | BK664_03920 | Not Available | Negative | 913625 - 917095 | 126700.0 |
| tetr family transcriptional regulator | BK664_03925 | Not Available | Negative | 917342 - 917881 | 19708.6 |
| mfs transporter | BK664_03930 | Not Available | Positive | 917973 - 919166 | 41758.0 |
| cupin | BK664_03935 | Not Available | Positive | 919209 - 919520 | 11628.8 |
| c4-dicarboxylate abc transporter | BK664_03940 | Not Available | Positive | 919626 - 920777 | 41335.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
