Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | BK664_03695 | Not Available | Positive | 868838 - 870274 | 49820.4 |
| succinate--coa ligase subunit beta | BK664_03700 | Not Available | Positive | 870475 - 871641 | 41281.9 |
| succinate--coa ligase subunit alpha | BK664_03705 | Not Available | Positive | 871641 - 872522 | 29948.5 |
| branched-chain amino acid transport system ii carrier protein | BK664_03710 | Not Available | Positive | 872944 - 874257 | 45317.9 |
| hypothetical protein | BK664_03715 | Not Available | Positive | 874416 - 875153 | 27656.1 |
| hypothetical protein | BK664_03720 | Not Available | Positive | 875153 - 875554 | 14853.7 |
| hypothetical protein | BK664_03725 | Not Available | Negative | 875632 - 875865 | 8157.47 |
| thioesterase | BK664_03730 | Not Available | Positive | 876026 - 876502 | 17016.7 |
| thioesterase | BK664_03735 | Not Available | Positive | 876499 - 876951 | 16555.0 |
| molecular chaperone htpg | BK664_03740 | Not Available | Positive | 877033 - 878937 | 71240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
