Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/betaine abc transporter substrate-binding protein | BK664_03645 | Not Available | Positive | 855896 - 856747 | 30732.0 |
| hypothetical protein | BK664_03650 | Not Available | Positive | 856986 - 857297 | 11442.1 |
| cation acetate symporter | BK664_03655 | Not Available | Positive | 857294 - 858952 | 58688.2 |
| citrate (si)-synthase | BK664_03660 | Not Available | Negative | 859472 - 860761 | 47705.7 |
| succinate dehydrogenase, cytochrome b556 subunit | BK664_03665 | Not Available | Positive | 861125 - 861499 | 13337.0 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | BK664_03670 | Not Available | Positive | 861493 - 861861 | 13415.6 |
| succinate dehydrogenase flavoprotein subunit | BK664_03675 | Not Available | Positive | 861865 - 863640 | 63723.8 |
| succinate dehydrogenase iron-sulfur subunit | BK664_03680 | Not Available | Positive | 863652 - 864356 | 26040.6 |
| 2-oxoglutarate dehydrogenase e1 component | BK664_03685 | Not Available | Positive | 864633 - 867464 | 106667.0 |
| dihydrolipoamide succinyltransferase | BK664_03690 | Not Available | Positive | 867507 - 868727 | 42170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
