Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | BK664_03545 | Not Available | Negative | 831669 - 832388 | 25474.6 |
| mfs transporter | BK664_03550 | Not Available | Negative | 832572 - 833777 | 42480.1 |
| hypothetical protein | BK664_03555 | Not Available | Positive | 834022 - 834642 | 21392.9 |
| thiosulfate transporter subunit | BK664_03560 | Not Available | Negative | 834823 - 835821 | 36708.4 |
| ion transporter | BK664_03565 | Not Available | Negative | 835937 - 836761 | 30809.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK664_03570 | Not Available | Positive | 836980 - 839553 | 88920.0 |
| alpha/beta hydrolase | BK664_03575 | Not Available | Positive | 839615 - 840430 | 29295.2 |
| urea transporter | BK664_03580 | Not Available | Negative | 840448 - 841362 | 32290.3 |
| pyruvate kinase | BK664_03585 | Not Available | Negative | 841500 - 842915 | 51412.1 |
| glycerate kinase | BK664_03590 | Not Available | Negative | 842905 - 844185 | 44471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
