Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmb | BK664_03495 | Not Available | Positive | 823868 - 824536 | 23106.6 |
| heme abc transporter permease | BK664_03500 | Not Available | Positive | 824612 - 825367 | 27871.8 |
| heme exporter protein ccmd | BK664_03505 | Not Available | Positive | 825364 - 825540 | 6553.07 |
| cytochrome c biogenesis protein ccme | BK664_03510 | Not Available | Positive | 825537 - 825992 | 16113.6 |
| c-type cytochrome biogenesis protein ccmf | BK664_03515 | Not Available | Positive | 825996 - 827984 | 72384.8 |
| thiol:disulfide interchange protein | BK664_03520 | Not Available | Positive | 827981 - 828517 | 20046.6 |
| cytochrome c-type biogenesis protein ccmh | BK664_03525 | Not Available | Positive | 828514 - 828987 | 17836.6 |
| c-type cytochrome biogenesis protein ccmi | BK664_03530 | Not Available | Positive | 828980 - 830182 | 43300.0 |
| hypothetical protein | BK664_03535 | Not Available | Positive | 830197 - 830601 | 14613.3 |
| transcriptional regulator | BK664_03540 | Not Available | Negative | 830649 - 831536 | 32018.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
