Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-glucose 4,6-dehydratase | BK664_03195 | Not Available | Positive | 764227 - 765309 | 39770.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BK664_03200 | Not Available | Positive | 765306 - 765866 | 20831.5 |
| sam-dependent methyltransferase | BK664_03205 | Not Available | Positive | 765863 - 767089 | 44994.6 |
| epimerase | BK664_03210 | Not Available | Positive | 767086 - 767943 | 31081.1 |
| methyltransferase | BK664_03215 | Not Available | Positive | 767933 - 769003 | 39570.9 |
| cephalosporin hydroxylase | BK664_03220 | Not Available | Positive | 769020 - 769757 | 27814.2 |
| glycosyl transferase family 2 | BK664_03225 | Not Available | Positive | 769810 - 772743 | 109143.0 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | BK664_03230 | Not Available | Positive | 772774 - 773775 | 37070.4 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | BK664_03235 | Not Available | Positive | 773772 - 774935 | 43057.3 |
| pseudaminic acid cytidylyltransferase | BK664_03240 | Not Available | Positive | 774942 - 775637 | 25594.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
