Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin secretion protein d | BK664_02890 | Not Available | Negative | 683827 - 685203 | 50260.2 |
| abc transporter | BK664_02895 | Not Available | Negative | 685213 - 687372 | 78249.0 |
| channel protein tolc | BK664_02900 | Not Available | Negative | 687516 - 688874 | 50305.0 |
| rtx toxin | BK664_02905 | Not Available | Positive | 689467 - 696096 | 219202.0 |
| hypothetical protein | BK664_02910 | Not Available | Positive | 696353 - 698299 | 71983.4 |
| hypothetical protein | BK664_02915 | Not Available | Positive | 698418 - 700367 | 70469.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK664_02920 | Not Available | Positive | 700648 - 702942 | 78851.7 |
| hypothetical protein | BK664_02925 | Not Available | Negative | 703013 - 703789 | 27490.0 |
| hypothetical protein | BK664_02935 | Not Available | Negative | 705129 - 706313 | 43470.1 |
| hypothetical protein | BK664_02940 | Not Available | Negative | 706741 - 708684 | 70844.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
