Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_02840 | Not Available | Positive | 675011 - 675904 | 32387.2 |
| hypothetical protein | BK664_02845 | Not Available | Negative | 675987 - 676319 | 11598.0 |
| phosphopantetheine-containing protein | BK664_02850 | Not Available | Negative | 676306 - 676557 | 9487.27 |
| mbl fold metallo-hydrolase | BK664_02855 | Not Available | Negative | 676614 - 677339 | 27196.2 |
| sodium:solute symporter | BK664_02860 | Not Available | Negative | 677425 - 678804 | 48791.7 |
| nitrate reductase | BK664_02865 | Not Available | Negative | 678959 - 680470 | 53432.8 |
| duf4440 domain-containing protein | BK664_02870 | Not Available | Negative | 680525 - 680932 | 15376.9 |
| agmatinase | BK664_02875 | Not Available | Negative | 680942 - 681892 | 34192.3 |
| lysr family transcriptional regulator | BK664_02880 | Not Available | Positive | 682205 - 683101 | 33275.2 |
| dtw domain-containing protein | BK664_02885 | Not Available | Positive | 683116 - 683712 | 21647.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
