Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | BK664_02730 | Not Available | Negative | 649568 - 650053 | 18136.2 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | BK664_02735 | Not Available | Positive | 650239 - 651474 | 45102.8 |
| alpha-ketoacid dehydrogenase subunit beta | BK664_02740 | Not Available | Positive | 651476 - 652534 | 38649.1 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | BK664_02745 | Not Available | Positive | 652535 - 653812 | 45212.9 |
| dihydrolipoyl dehydrogenase | BK664_02750 | Not Available | Positive | 653830 - 655212 | 48588.8 |
| branched chain amino acid aminotransferase | BK664_02755 | Not Available | Positive | 655447 - 656466 | 37063.2 |
| lysine transporter lyse | BK664_02765 | Not Available | Positive | 658166 - 658774 | 21210.9 |
| transcriptional regulator | BK664_02770 | Not Available | Negative | 658771 - 659535 | 27854.5 |
| cytochrome | BK664_02775 | Not Available | Positive | 659618 - 660739 | 40240.4 |
| hypothetical protein | BK664_02785 | Not Available | Positive | 666314 - 666556 | 8915.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
