Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqd | BK664_02630 | Not Available | Negative | 627037 - 627309 | 10191.2 |
| pyrroloquinoline quinone biosynthesis protein pqqc | BK664_02635 | Not Available | Negative | 627306 - 628058 | 28899.4 |
| pyrroloquinoline quinone biosynthesis protein pqqb | BK664_02640 | Not Available | Negative | 628214 - 629128 | 33527.0 |
| aldehyde dehydrogenase | BK664_02645 | Not Available | Negative | 629551 - 631071 | 55131.2 |
| dehydrogenase | BK664_02650 | Not Available | Negative | 631325 - 633103 | 64536.7 |
| mbl fold metallo-hydrolase | BK664_02655 | Not Available | Negative | 633366 - 634304 | 34328.4 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | BK664_02660 | Not Available | Negative | 634321 - 635082 | 27959.7 |
| amino acid abc transporter substrate-binding protein | BK664_02665 | Not Available | Negative | 635082 - 635957 | 32693.0 |
| cytochrome c-550 pedf | BK664_02670 | Not Available | Negative | 635961 - 636422 | 16391.3 |
| branched-chain amino acid abc transporter substrate-binding protein | BK664_02675 | Not Available | Positive | 637013 - 638197 | 43273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
