Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK664_02580 | Not Available | Negative | 616545 - 617165 | 23538.4 |
| hypothetical protein | BK664_02585 | Not Available | Positive | 617305 - 617670 | 12584.0 |
| copper resistance protein copd | BK664_02590 | Not Available | Positive | 617674 - 618534 | 31033.6 |
| porin | BK664_02595 | Not Available | Positive | 618694 - 619992 | 47451.8 |
| nad-dependent dehydratase | BK664_02600 | Not Available | Positive | 620182 - 621006 | 30280.6 |
| gluconolactonase | BK664_02605 | Not Available | Positive | 621060 - 621944 | 32011.8 |
| aldose epimerase | BK664_02610 | Not Available | Positive | 621941 - 622816 | 32323.4 |
| hybrid sensor histidine kinase/response regulator | BK664_02615 | Not Available | Negative | 622801 - 624528 | 63644.7 |
| alcohol dehydrogenase | BK664_02620 | Not Available | Negative | 624512 - 625675 | 41309.1 |
| pyrroloquinoline quinone biosynthesis protein pqqe | BK664_02625 | Not Available | Negative | 625917 - 627059 | 42812.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
