Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase | BK664_02530 | Not Available | Positive | 603554 - 604669 | 40500.1 |
| hypothetical protein | BK664_02535 | Not Available | Negative | 605086 - 605334 | 9186.1 |
| helix-turn-helix transcriptional regulator | BK664_02540 | Not Available | Negative | 605464 - 606960 | 55457.1 |
| rna polymerase subunit sigma-24 | BK664_02545 | Not Available | Negative | 607212 - 608105 | 32495.7 |
| alkylhydroperoxidase | BK664_02550 | Not Available | Negative | 608109 - 608543 | 16472.5 |
| zn-dependent hydrolase | BK664_02555 | Not Available | Negative | 608703 - 609986 | 45192.2 |
| nitrate reductase | BK664_02560 | Not Available | Negative | 610124 - 611608 | 53357.0 |
| dihydropyrimidinase | BK664_02565 | Not Available | Positive | 612164 - 613603 | 52469.0 |
| dihydropyrimidine dehydrogenase | BK664_02570 | Not Available | Positive | 613763 - 615130 | 49215.6 |
| dihydropyrimidine dehydrogenase subunit b | BK664_02575 | Not Available | Positive | 615131 - 616405 | 45984.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
