Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_02425 | Not Available | Positive | 579167 - 582118 | 106524.0 |
| lysine transporter lyse | BK664_02430 | Not Available | Positive | 582706 - 583326 | 22118.6 |
| eama family transporter | BK664_02435 | Not Available | Positive | 583401 - 584441 | 37088.6 |
| xre family transcriptional regulator | BK664_02440 | Not Available | Positive | 584522 - 585604 | 39646.8 |
| pep phosphonomutase | BK664_02445 | Not Available | Positive | 585648 - 586451 | 28073.8 |
| dna-3-methyladenine glycosylase | BK664_02450 | Not Available | Positive | 586456 - 587073 | 22941.7 |
| phenylacetic acid degradation protein | BK664_02455 | Not Available | Positive | 587368 - 587763 | 13749.6 |
| alanine acetyltransferase | BK664_02460 | Not Available | Positive | 587801 - 588289 | 17926.1 |
| pp_00493 | BK664_02470 | Not Available | Negative | 589667 - 590275 | Not Available |
| universal stress protein uspa | BK664_02475 | Not Available | Positive | 590436 - 591299 | 31177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
