Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_02375 | Not Available | Negative | 566186 - 566764 | 20443.5 |
| twin-arginine translocation pathway signal protein | BK664_02380 | Not Available | Negative | 566766 - 568934 | 76830.1 |
| (2fe-2s)-binding protein | BK664_02385 | Not Available | Negative | 568960 - 569415 | 15787.1 |
| short-chain dehydrogenase/reductase | BK664_02390 | Not Available | Negative | 569581 - 570426 | 29661.4 |
| lysr family transcriptional regulator | BK664_02395 | Not Available | Positive | 570541 - 571461 | 33453.4 |
| hypothetical protein | BK664_02400 | Not Available | Negative | 571492 - 572850 | 50139.3 |
| hypothetical protein | BK664_02405 | Not Available | Positive | 573031 - 573534 | 18621.2 |
| arac family transcriptional regulator | BK664_02410 | Not Available | Positive | 573570 - 574403 | 31580.4 |
| hypothetical protein | BK664_02415 | Not Available | Positive | 574639 - 578304 | 135830.0 |
| lysine transporter lyse | BK664_02420 | Not Available | Negative | 578315 - 578902 | 20824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
