Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | BK664_02325 | Not Available | Positive | 554123 - 555571 | 53941.6 |
| abc transporter substrate-binding protein | BK664_02330 | Not Available | Positive | 555761 - 557593 | 69748.1 |
| hypothetical protein | BK664_02335 | Not Available | Positive | 557590 - 559431 | 69791.9 |
| microcin abc transporter permease | BK664_02340 | Not Available | Positive | 559436 - 560509 | 39321.6 |
| abc transporter permease | BK664_02345 | Not Available | Positive | 560511 - 561530 | 37894.7 |
| microcin abc transporter atp-binding protein | BK664_02350 | Not Available | Positive | 561532 - 563142 | 59340.9 |
| enoyl-[acyl-carrier-protein] reductase | BK664_02355 | Not Available | Positive | 563164 - 563958 | 27982.5 |
| lysr family transcriptional regulator | BK664_02360 | Not Available | Negative | 564140 - 565006 | 31955.3 |
| glyoxalase | BK664_02365 | Not Available | Positive | 565118 - 565543 | 15716.7 |
| ggdef domain-containing protein | BK664_02370 | Not Available | Negative | 565512 - 566111 | 22160.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
