Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK664_02225 | Not Available | Negative | 535676 - 536257 | 21501.0 |
| gamma-glutamyltransferase | BK664_02230 | Not Available | Negative | 536414 - 538159 | 62706.3 |
| sodium:dicarboxylate symporter | BK664_02235 | Not Available | Negative | 538346 - 539605 | 44277.9 |
| glyoxalase | BK664_02240 | Not Available | Negative | 539720 - 540145 | 15995.9 |
| aspartate aminotransferase | BK664_02245 | Not Available | Negative | 540260 - 541468 | 43962.7 |
| lysr family transcriptional regulator | BK664_02250 | Not Available | Positive | 541570 - 542448 | 32419.4 |
| transcriptional regulator | BK664_02255 | Not Available | Negative | 542501 - 542866 | 13611.3 |
| hypothetical protein | BK664_02260 | Not Available | Positive | 543129 - 545222 | 79827.8 |
| dna polymerase v subunit umuc | BK664_02265 | Not Available | Negative | 545380 - 546660 | 47711.9 |
| peptidase s24 | BK664_02270 | Not Available | Negative | 546647 - 547081 | 15760.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
