Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_01870 | Not Available | Negative | 462583 - 462822 | 8864.76 |
| diguanylate cyclase | BK664_01875 | Not Available | Positive | 463875 - 465452 | 58246.1 |
| hypothetical protein | BK664_01880 | Not Available | Positive | 466179 - 466517 | 12784.6 |
| hypothetical protein | BK664_01885 | Not Available | Negative | 466639 - 466866 | 7861.82 |
| hypothetical protein | BK664_01890 | Not Available | Positive | 467300 - 467542 | 8933.89 |
| hypothetical protein | BK664_01895 | Not Available | Negative | 468191 - 468598 | 14668.1 |
| histidine kinase | BK664_01900 | Not Available | Positive | 469144 - 470589 | 52053.8 |
| cupin | BK664_01905 | Not Available | Positive | 471686 - 472216 | 19297.0 |
| cytochrome d ubiquinol oxidase subunit ii | BK664_01910 | Not Available | Negative | 472228 - 473229 | 36265.2 |
| cytochrome ubiquinol oxidase subunit i | BK664_01915 | Not Available | Negative | 473242 - 474618 | 50992.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
