Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_01395 | Not Available | Positive | 367461 - 368354 | 32395.7 |
| gnat family n-acetyltransferase | BK664_01400 | Not Available | Negative | 368320 - 368934 | 22818.1 |
| lysine decarboxylase | BK664_01405 | Not Available | Negative | 368949 - 371204 | 82754.0 |
| dna polymerase iii subunit epsilon | BK664_01410 | Not Available | Negative | 371416 - 372189 | 28098.3 |
| hypothetical protein | BK664_01415 | Not Available | Positive | 373547 - 375238 | 64164.0 |
| integrase | BK664_01420 | Not Available | Positive | 375303 - 377366 | 78424.5 |
| hypothetical protein | BK664_01425 | Not Available | Positive | 377366 - 377788 | 16126.7 |
| hypothetical protein | BK664_01430 | Not Available | Positive | 377814 - 378032 | 7950.89 |
| transposase | BK664_01435 | Not Available | Negative | 378168 - 379082 | 35705.0 |
| hypothetical protein | BK664_01445 | Not Available | Positive | 380419 - 381063 | 24655.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
