Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_01345 | Not Available | Negative | 358922 - 359182 | 9645.49 |
| rhomboid family intramembrane serine protease | BK664_01350 | Not Available | Negative | 359216 - 360085 | 32088.8 |
| serine/threonine protein phosphatase | BK664_01355 | Not Available | Negative | 360082 - 361053 | 36795.0 |
| nad kinase | BK664_01360 | Not Available | Negative | 361053 - 361943 | 32214.2 |
| cobalt chelatase | BK664_01365 | Not Available | Positive | 362056 - 363006 | 36672.8 |
| arsenical efflux pump membrane protein arsb | BK664_01370 | Not Available | Negative | 363119 - 364402 | 45487.2 |
| hypothetical protein | BK664_01375 | Not Available | Negative | 364544 - 365647 | 41191.6 |
| tetr family transcriptional regulator | BK664_01380 | Not Available | Positive | 365703 - 366362 | 24879.9 |
| acp phosphodiesterase | BK664_01385 | Not Available | Negative | 366376 - 366936 | 19913.9 |
| hypothetical protein | BK664_01390 | Not Available | Positive | 367112 - 367372 | 9379.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
