Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | BK664_01035 | Not Available | Positive | 272516 - 273589 | 37885.1 |
| 1,4-alpha-glucan branching enzyme | BK664_01040 | Not Available | Negative | 273713 - 275944 | 83914.8 |
| maltose alpha-d-glucosyltransferase | BK664_01045 | Not Available | Negative | 275947 - 279288 | 125091.0 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | BK664_01050 | Not Available | Negative | 279448 - 281442 | 75644.3 |
| methyltransferase | BK664_01055 | Not Available | Negative | 281970 - 282476 | 17536.5 |
| duf3203 domain-containing protein | BK664_01060 | Not Available | Positive | 282599 - 282832 | 8466.94 |
| cytochrome c oxidase accessory protein ccog | BK664_01065 | Not Available | Positive | 283028 - 284458 | 53187.8 |
| gntr family transcriptional regulator | BK664_01070 | Not Available | Positive | 284714 - 286123 | 52120.3 |
| oxidoreductase | BK664_01075 | Not Available | Negative | 286253 - 286999 | 26190.5 |
| histidine kinase | BK664_01080 | Not Available | Negative | 287093 - 289174 | 74807.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
