Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malto-oligosyltrehalose synthase | BK664_00985 | Not Available | Positive | 260932 - 263718 | 104658.0 |
| hypothetical protein | BK664_00990 | Not Available | Positive | 263740 - 264057 | 11147.2 |
| glycogen debranching enzyme glgx | BK664_00995 | Not Available | Positive | 264172 - 266331 | 81492.8 |
| acyl-coa dehydrogenase | BK664_01000 | Not Available | Positive | 266333 - 267322 | 35303.1 |
| acetylglucosaminylphosphatidylinositol deacetylase | BK664_01005 | Not Available | Positive | 267319 - 268077 | 27821.4 |
| sam-dependent methyltransferase | BK664_01010 | Not Available | Positive | 268074 - 268673 | 22699.9 |
| glycosyl transferase | BK664_01015 | Not Available | Positive | 268670 - 269329 | 24003.4 |
| pig-l domain-containing protein | BK664_01020 | Not Available | Positive | 269451 - 270209 | 27861.7 |
| hypothetical protein | BK664_01025 | Not Available | Positive | 270390 - 271190 | 30572.3 |
| hypothetical protein | BK664_01030 | Not Available | Positive | 271588 - 271956 | 13333.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
