Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK664_00935 | Not Available | Positive | 248370 - 248933 | 20955.1 |
| hypothetical protein | BK664_00940 | Not Available | Positive | 248990 - 249466 | 18773.8 |
| dimethyl sulfone monooxygenase sfng | BK664_00945 | Not Available | Negative | 249591 - 250685 | 40309.5 |
| monooxygenase | BK664_00950 | Not Available | Positive | 251055 - 252293 | 45216.9 |
| hypothetical protein | BK664_00955 | Not Available | Positive | 252503 - 253282 | 27378.9 |
| nadh pyrophosphatase | BK664_00960 | Not Available | Negative | 253250 - 254080 | 31034.0 |
| enoyl-coa hydratase | BK664_00965 | Not Available | Negative | 254087 - 254899 | 29534.7 |
| starch synthase | BK664_00970 | Not Available | Positive | 255461 - 257047 | 57179.4 |
| malto-oligosyltrehalose trehalohydrolase | BK664_00975 | Not Available | Positive | 257061 - 258860 | 67061.0 |
| 4-alpha-glucanotransferase | BK664_00980 | Not Available | Positive | 258857 - 260935 | 75912.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
